Additional file 2: of Association of bovine major histocompatibility complex (BoLA) gene polymorphism with colostrum and milk microbiota of dairy cows during the first week of lactation

Table S1. Summary statistics for comparison of alpha-diversity of microbial communities. Table S2. Summary statistics for comparison of beta-diversity of microbial communities (PERMANOVA test statistics). Table S3. Summary statistics for repeated measurement analysis of bacterial communities. Table S4. Summary statistics for repeated measurement analysis of fungal communities. Table S5. NCBI blastn search result for selected bacterial OTUs. Table S6. Primer design and equences for barcoded PCR amplification of the V1-V2 regions of bacterial 16S rRNA genes. Table S7. Primer design and sequences for barcoded PCR amplification of the ITS2 of the eukaryotic ribosomal genes. Table S8. Metadata used for processing of 16S rRNA gene raw sequences, bioinformatics and statistical analyses of bacterial communities. Table S9. Metadata used for processing of ITS2 raw sequences, bioinformatics and statistical analyses of fungal communities. (XLSX 48Â kb)