Personalized production, non-genomic engineering, and time-resolved proteomics of therapeutic phages for biohazardous and multidrug-resistant bacteria

masurca.config => assembly config file p3.blastvog.enhanced.3.embl => final assembly of P3 phage with annotation (embl-file format - *not* genbank!) p3.comp.pdf|png => genome duplication analysis p3.guppy.fastq.gz => MinION reads p3.noecoli.guppy.fastq.gz => MinION reads (E. coli reads removed) p3.r.1|2.fq.gz => trimmed/E. coli removed reads from Illumina sequencing P3_S2* => original Illumina reads

masurca.config：组装配置文件
p3.blastvog.enhanced.3.embl：带有注释的P3噬菌体最终组装结果（采用EMBL文件格式（EMBL file format），而非GenBank格式！）
p3.comp.pdf|png：基因组重复序列分析结果（PDF/PNG格式）
p3.guppy.fastq.gz：MinION测序读段（reads）
p3.noecoli.guppy.fastq.gz：已去除大肠杆菌（E. coli）读段的MinION测序读段
p3.r.1|2.fq.gz：经序列修剪且去除大肠杆菌读段的Illumina测序读段
P3_S2*：原始Illumina测序读段