Additional file 3: Table S3. of Small RNA profiling and degradome analysis reveal regulation of microRNA in peanut embryogenesis and early pod development

Figshare2017-03-10 更新2026-04-29 收录

数据链接：

https://figshare.com/articles/dataset/Additional_file_3_Table_S3_of_Small_RNA_profiling_and_degradome_analysis_reveal_regulation_of_microRNA_in_peanut_embryogenesis_and_early_pod_development/4720753 数据链接链接失效反馈

官方服务：

资源简介：

Detailed information of novel miRNAs in peanut. (XLS 46 kb)

创建时间：

2017-03-10

Novel and Conserved microRNAs in soybean floral whorls

植物microRNA

大豆研究

MicroRNAs (miRNAs) are a class of endogenous small non-coding RNAs (19â24 nt) that regulates de gene expression, mainly through mRNA targets cleavage and translation inhibition. In plants, miRNAs ha

NIAID Data Ecosystem110

Additional file 3: Table S3. of Genome-wide identification of soybean microRNA responsive to soybean cyst nematodes infection by deep sequencing

植物microRNA

大豆胞囊线虫

Novel miRNA prediction. A table of new miRNAs predicted by miRDeep2 with a score of one or greater. (XLSX 21Â kb)

NIAID Data Ecosystem80

we performed microRNA deep sequencing, analyzed the microRNAs and revealed the function of the corresponding target genes, as the first step to understanding the role of microRNAs in S. officinarum. 268 candidate miRNAs were screened from sequencing microRNA library with the total RNA from sugarcane leaves using the RNA-seq ESTs of all tissue of Saccharum officinarum from our group， public sugarcane ESTs from NCBI and the reference sorghum genome from Phytozome V9. After further analysis, 43 homologous miRNAs and 9 novel miRNAs were identified. Out of the 52 miRNAs, 6 were randomly chosen and verified by qRT-PCR and the putative miRNA targets’ function was analyzed. The identification of miRNAs and their targets not only will enable to understand the roles of miRNAs in sugarcane development and growth, but also enhances the understanding of miRNA-dependent mechanisms in highly polyploid species. Identification and Characterization of microRNAs from Saccharum officinarum L by deep s

植物microRNA

甘蔗基因组

In modern sugarcane cultivars, around 70-80% of the genetic information originates from Saccharum officinarum, which contributed important sugar content traits. Although several studies have identifie

NIAID Data Ecosystem30

Additional file 1: of Identification and characterisation of microRNAs and their target genes in phosphate-starved Nicotiana benthamiana by small RNA deep sequencing and 5â RACE analysis

植物microRNA

磷胁迫响应

Table S1. Microsoft Excel Worksheet (.xlsx). sRNA deep sequencing read matches to predicted pri-miRNA hairpins. Table S2. Computationally predicted miRNA targets in N. benthamiana. Table S3. Top targe

Figshare2018-12-18 更新90

Additional file 8: Table S4. of Small RNA profiling and degradome analysis reveal regulation of microRNA in peanut embryogenesis and early pod development

MicroRNA调控

花生生殖发育

Oligonucleotide primer sequences used for qRT-PCR. (XLS 31 kb)

Figshare2017-03-10 更新50