Integrative model of EFTS-ASPA by crosslinking MS and deep learning
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Integrative model of EFTS-ASPA by crosslinking MS and deep learning
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2024-09-18
相关数据集
Experiment data used in DeepHelicon
The data is for the paper titled "DeepHelicon: accurate prediction of inter-helical residue contacts in transmembrane protein by residual neural networks". It contains four sub-folders as fo
doi.org80
Additional file 4: of Functional insights from proteome-wide structural modeling of Treponema pallidum subspecies pallidum, the causative agent of syphilis
Table S4. Comparison of T. pallidum primary and tertiary structure-based functional annotations using only the top-ranked Phyre2 model template for each protein comparison. (XLSX 33 kb)
NIAID Data Ecosystem40
Helical packing arrangement decoy discrimination using a data set of 71 sequences with 2 or more TM helices (n = 71) and a data set of 57 sequences with 3 or more helices (n = 57).
Accuracy reflects the frequency at which the native or native model helical packing arrangement achieved the highest score compared to the decoy set.
NIAID Data Ecosystem30
MassiveFold data for target T1266
MassiveFold data generated for CASP16, in collaboration with CAPRI . 8040 predictions were generated for the target = 1005 x 8 sets of parameters. - a description of the setup can be found in `Massive
DataCite Commons2025-05-14 更新60
PDB coordinates of the first model for the complex between human UPF1-HD and SMG6-[398–494] region generated by AlphaFold (v3).
PDB coordinates of the first model for the complex between human UPF1-HD and SMG6-[398–494] region generated by AlphaFold (v3).
NIAID Data Ecosystem30
