Quantiles of the specificity score for the top 100 interactions ranked using median-of-ratios normalization and unique or non-unique across other normalizations.
Table S3. This table compares the sensitivity (true-positive rate) achieved by different normalization methods in the differential expression analysis at FPR (false-positive rate) threshold = 0.05 for
Table S2. This table compares the p values and q values of differential expression analysis by edgeR from different normalization methods for 12 genes which were PCR-verified positives in the AMPK dat
Background The Infinium EPIC array measures the methylation status ofâ>â850,000 CpG sites. The EPIC BeadChip uses a two-array design: Infinium Type I and Type II probes. These probe types exhi
