Experiment_ENCSR000CAC

Processed data for experiment ENCSR000CAC.

Files:

ENCSR000CAC_MACPET_Peaks.csv (peaks from MACPET)

ENCSR000CAC_MACS_Peaks.xls (peaks from MACS)

ENCSR000CAC_MACS_par2.Peaks.xls (peaks from MACS parameters

bw=600, slocal

)

ENCSR000CAC_MACS_par3.Peaks.xls (peaks from MACS parameters

bw=1000, llocal

)

ENCSR000CAC_MACS_par4.Peaks.xls (peaks from MACS parameters

bw=300, llocal

)

ENCSR000CAC_MACPET_interactions_window_i are the interactions using the MACPET peaks with windows i=0,...,1000

ENCSR000CAC_MACS_interactions_window_i are the interactions using the MACS peaks with windows i=0,...,1000, for MACS peaks on p-value 0.05.
ENCSR000CAC_MACS_0.01_interactions_window_i are the interactions using the
MACS peaks with windows i=0,...,1000, for MACS peaks on p-value 0.01
ENCSR000CAC_MACS_N_interactions_window_i
are the interactions using the
MACS peaks with windows i=0,...,1000, using the first N most significant
peaks from MACS, where N=total significant MACPET peaks at 0.05 p-value

ENCSR000CAC_MACPET_MotIV_run_i , i=1-5, results from MACPET peaks on a MotIV object.

ENCSR000CAC_MACS_MotIV_run_i , i=1-5, results from MACS peaks on a MotIV object.

ENCSR000CAC_MACS_par2_MotIV_run_i , i=1-5, results from MACS parameters 2 peaks on a MotIV object.

ENCSR000CAC_MACS_par3_MotIV_run_i , i=1-5, results from MACS parameters 3 peaks on a MotIV object.

ENCSR000CAC_MACS_par4_MotIV_run_i , i=1-5, results from MACS parameters 4 peaks on a MotIV object.

ENCSR000CAC_MACPET_rGADEM_run_i , i=1-5, results from MACPET peaks on a rGADEM object.

ENCSR000CAC_MACS_rGADEM_run_i , i=1-5, results from MACS peaks on a rGADEM object.

ENCSR000CAC_MACS_par2_rGADEM_run_i , i=1-5, results from MACS parameters 2 peaks on a rGADEM object.

ENCSR000CAC_MACS_par3_rGADEM_run_i , i=1-5, results from MACS parameters 3 peaks on a rGADEM object.

ENCSR000CAC_MACS_par4_rGADEM_run_i , i=1-5, results from MACS parameters 4 peaks on a rGADEM object.