首页/数据集/Detect R-loop signal by DRIP-seq in PA1 cell line. Detect R-loop signal by DRIP-seq in PA1 cell line

Detect R-loop signal by DRIP-seq in PA1 cell line. Detect R-loop signal by DRIP-seq in PA1 cell line

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R-loop检测

RIP-seq

数据链接：

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1055900 数据链接链接失效反馈

官方服务：

资源简介：

DRIP-seq of PA1 cells Overall design: DRIP-seq of PA1 cells

应用场景：

创建时间：

2023-12-22

CRISPR-Cas9RNA检测

RIP-seq

RIP-seq analysis to identify CjCas9 bound RNAs using co-immunoprecipitation and sequencing in CG84-21. Overall design: Cas9 was chromosomally tagged using 3xFLAG epitope at the C-terminus in Campyloba

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Additional file 5 of RIP-seq reveals LINE-1 ORF1p association with p-body enriched mRNAs

转座子分析

RIP-seq

Additional file 5: Table S1. L1EM estimates of locus specific LINE-1 expression for each of the samples.

Figshare2021-02-10 更新40

Genome-wide mapping of G-quadruplex structures with CUT&Tag. Genome-wide mapping of G-quadruplex structures with CUT&Tag

G-四链体全基因组定位

R-loop检测

Single-stranded genomic DNA can fold into G-quadruplex (G4) structures or form DNA:RNA hybrids (R loops). Recent evidence suggests that such non-canonical DNA structures affect gene expression, DNA me

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Raw data of RIP-seq

RIP-seq

RNA结合蛋白靶标

Confluent HBMECs (4×107) organized in a monolayer were harvested for the sample preparation of RIP-sequencing. RNA-protein complexes were immunoprecipitated with antibodies targeted to occludin, then

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DREAM-seq, an endonucleases-assisted mapping of R-loops: MCF-7. DREAM-seq, an endonucleases-assisted mapping of R-loops: MCF-7

R-loop检测

癌细胞系

DREAM-seq, an endonucleases-assisted mapping of R-loops: MCF-7 Overall design: Two MCF-7 cell samples, including Mock and Rnase H treated samples

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