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Scripts and datafiles required to identify and quantify novel exonisation overlapping repeat elements
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2019-07-08
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Additional file 6 of The genome and transcriptome of the snail Biomphalaria sudanica s.l.: immune gene diversification and highly polymorphic genomic regions in an important African vector of Schistosoma mansoni
Additional file 6: Supplementary Table 5. Summary table of repeated elements composition of the Biomphalaria sudanica genome.
Figshare2024-09-11 更新60
A Novel Analytical Strategy to Identify Fusion Transcripts between Repetitive Elements and Protein Coding-Exons Using RNA-Seq
Repetitive elements (REs) comprise 40–60% of the mammalian genome and have been shown to epigenetically influence the expression of genes through the formation of fusion transcript (FTs). We previousl
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Repetitive element counts in duplication and deletion structural variant calls in the Nachman strains.
Repetitive element counts in duplication and deletion structural variant calls in the Nachman strains.
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Comparisons among different repetitive elements in MHC class II regions from the seven species sampled.
A∼F corresponds to the subregions of MHC class II region in Figure 4. The maximum values are highlighted in bold.
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Additional file 4 of The transcriptional trajectories of pluripotency and differentiation comprise genes with antithetical architecture and repetitive-element content
Additional file 4: Supplemental Table S3. Repetitive elements enrichments/depletions in the analyzed gene sets.
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