Additional file 14 of Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically relevant datasets

Additional file 14: Table S13. Quality Features and Plow values as input and output by seqQscorer respectively. Column prefixes designate types of quality features as follows. BowtieMI: mapping metrics from bowtie2 ran on the first fastq file for paired reads to allow comparison to single read data as used by seqQscorer. FASTQC: ordinal outputs of FastQC. TSS: percentage of counted reads in bins around transcription start sites (TSS) with relative bin position in base pairs given in full feature name. ReadsAnno: percentage of sequencing reads in different types of genomic regions described in full feature name. Accession: SRR run accession number. Dataset: GEO accession number. Plow: low-quality probability predicted by the seqQscorer tool.