Additional file 2: of Time matters! Developmental shift in gene expression between the head and the trunk region of the cichlid fish Astatotilapia burtoni

Table S1. Sequencing data and processing. Table S2. Statistics for the improved genome annotation. Table S3. De novo assembly statistics. Table S4. Hybrid reference assembly summary statistics. Table S5. Species distribution in Blast annotation of the new transcriptome assembly. For each sequences, we exported the top blast hit and its species of origin. Species names as well as taxa are provided. Table S6. Transcript expression outliers in the trunk (Fig. 4c. Table S7. Number of differentially expressed transcripts for all pairwise comparisons. Table S8. Number of transcripts for each expression profile shown in Fig. 6b for each tissue type. Table S9. Number of transcripts in each gene expression network module. Table S10. Number of novel transcripts per gene expression module. Table S11. IDs of transcripts under positive selection. Table S12. GO annotations for fin development and genes within these categories for the lightyellow module. (XLSX 115 kb)