Seurat CloneTracer Cohort

<strong>seurat v3 object</strong> <br> <strong>ASSAYS:</strong> AB: Antibody expression data RNA: mRNA expression data <br> <strong>DIMENSIONALITY REDUCTION</strong> Projected: Data was projected on the reference dataset MOFAUMAP coordinates (Triana et al., 2021) scanorama: Data was integrted with Scanorama, using the cohort as Batch key umap: umap computed from Scanorama components <br> <strong>METADATA</strong> patient: Patient cohort: Cohort day: Day of sampling (relevant for Cohort B only) ct: Projected cell type (Triana et al., 2021) pseudo_myel: Projected myeloid pseudtime (Triana et al., 2021) id: Unsupervised clustering result leukemia_prob: CloneTracer leukemia probability status: Binarized status (healthy, leukemic, unsure) <br>