Supplementary data: ONT for Listeria monocytogenes outbreak detection

Supplementary data for the publication "Oxford Nanopore’s 2024 sequencing technology for Listeria monocytogenes outbreak detection and source attribution: progress and clone-specific challenges" L. monocytogenes assemblies generated from Illumina-only data (shovill) ONT-only data (100x coverage, sup@v5.0 + flye + flye polisher + medaka [model r103_min_high_g360]) ONT + Illumina data (100x ONT coverage, sup@v5.0 + flye + flye polisher + polypolish) Raw ONT pod5 data from three L. monocytogenes isolates (N19-1094, N21-2956, N23-1883) with GAAG6mAC / GT4mCTTC methylations, among other methylated motifs