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Climate impacts on blacklegged tick host-seeking behavior - supplementary code

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Mendeley Data2026-04-18 收录
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This Igor Pro experiment file contains 1) the code for the dynamic state variable model described in "Climate impacts on blacklegged tick host-seeking behavior" in the International Journal for Parasitology (2018), 2) the code for forward simulations of tick behavior through the matrices generated by the model, 3) matrices generated by the model, including those used to generate the indicated figures in the main text of the manuscript, and 4) the figures themselves. Instructions for running the model are included in the annotations for the code. Within the folders containing data for the individual figures, folder names primarily correspond to the naming convention "Tq_aVq*10_Tr_aVr*10" (e.g.: "20_8_20_9" means an experiment in which the questing temperature was set to 20C, questing aV was set to 0.8, resting temperature was set to 20C, and resting aV was set to 0.9). Within each folder, significant generated waves include: -VAvg and the corresponding VConfInt (the fitness matrix, averaged across multiple stochastic runs of the dynamic state variable equation) -DAvg and the corresponding DConfInt (the matrix of optimal pq(t) decisions, again averaged) -monte (a record of fitness scores for a forward-simulated tick) -monte_p_q (a record of pq(t) decisions for a forward-simulated tick) -monte_x (a record of lipid reserves for a forward-simulated tick) -monte_w (a record of water reserves for a forward-simulated tick)

本Igor Pro实验文件包含以下4类内容:1)发表于《国际寄生虫学期刊(International Journal for Parasitology)》2018年的论文《气候对黑腿蜱(blacklegged tick)宿主搜寻行为的影响(Climate impacts on blacklegged tick host-seeking behavior)》中所述的动态状态变量模型(dynamic state variable model)代码;2)基于该模型生成的矩阵,用于对蜱虫行为进行正向模拟(forward simulation)的代码;3)该模型生成的各类矩阵,其中包含用于生成论文正文指定图表的矩阵;4)图表本身。 模型的运行说明已内嵌于代码的注释中。在存储单张图表对应数据的文件夹内,文件夹命名主要遵循"Tq_aVq*10_Tr_aVr*10"的命名规则(例如:"20_8_20_9"代表一次实验场景:寻宿温度设定为20℃,寻宿行为的aV值设为0.8,静止温度设定为20℃,静止行为的aV值设为0.9)。 每个文件夹内的核心生成波形包括: - VAvg及其对应的VConfInt(即经动态状态变量方程多次随机运行后取平均得到的适合度矩阵(fitness matrix)) - DAvg及其对应的DConfInt(即最优pq(t)决策矩阵,同样经多次运行取平均后得到) - monte(正向模拟蜱虫的适合度得分记录) - monte_p_q(正向模拟蜱虫的pq(t)决策记录) - monte_x(正向模拟蜱虫的脂质储备(lipid reserves)记录) - monte_w(正向模拟蜱虫的水分储备(water reserves)记录)

创建时间:
2018-12-01
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