遇见数据集

Ceraceosorus_rDNA_heterogeneity_SupplementaryData

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Figshare2024-02-27 更新2026-04-08 收录
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This item provides supplementary data used for examining rDNA sequence heterogeneity in <i>Ceraceosorus </i>and allied fungal species in Ustilaginomycotina. It contains raw data from targeted amplicon Illumina sequencing of rDNA regions in each sample, and reference rDNA sequences used for examining sequence heterogeneity. The file also contains SNP vcf reports obtained from targeted amplicon Illumina sequencing, as well as SNP vcf reports obtained from WGS Illumina sequencing. The raw WGS sequencing data can be retrieved from the DOE-Joint Genome Institute Fungal Genomics Program upon a request. Sample IDs correspond to fungal species as follows:ATCC22867: Strain for <i>Ceraceosorus bombacis</i>KRAM_F-57385, KRAM_F-57386, KRAM_F-57387: Voucher specimens for <i>Ceraceosorus africanus</i>MCA4658: Strain for <i>Ceraceosorus guamensis</i>SA252w: Strain for <i>Ceraceosorus americanus</i>MCA3882: Strain for <i>Meira miltonrushii</i>MCA4186: Strain for <i>Tilletiopsis washingtonensis</i>MCA4718: Strain for <i>Pseudomicrostroma glucosiphilum</i>SA807: Strain for <i>Violaceomyces palustris</i>TKC58A: Strain for <i>Mycosarcoma</i> (<i>Ustilago</i>)<i> maydis</i>

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2024-02-27
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