Gene ontology (GO) analysis of the deregulated genes in the lif2-1 mutant.

Among the 1008 deregulated genes in lif2-1, 982 are associated with a GO term and were analysed using the agriGO toolkit. GO terms with the best p-value (p−8) were selected to illustrate lif2 transcriptome specificities. Query item: number of deregulated genes in lif2 in a given GO class. Reference item: total number of genes in a given GO class. The A. thaliana genome accounts for a total of 37767 items in the agriGO toolkit. The normed frequency (NF) = (Query item/Ref item)/(982/37767).