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Dataset for a Multivariate Genome-Wide Association Study of Psycho-Cardiometabolic Multimorbidity

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doi.org2025-03-25 收录
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https://doi.org/10.15125/BATH-01179
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This dataset contains summary statistics from a multivariate genome-wide association study of major depression, coronary artery disease, and type 2 diabetes (i.e., psycho-cardiometabolic multimorbidity). There are two sets of summary statistics: version with UK Biobank (effective sample size = 562,507) and version without UK Biobank (effective sample size = 156,717). Summary statistics for non-heterogeneous variants are also provided (obtained by removing variants with Q SNP P < 5e-8 and directionally discordant univariate effect estimates). For a given single nucleotide polymorphism (SNP), the summary statistics include the chromosome; position; minor allele frequency; effect allele; non-effect allele; effect of the SNP on the common factor; standard error; ratio of effect/SE; p-value of Z_Estimate; chi-square statistic, providing the heterogeneity estimate for that SNP (equivalent to the Q SNP index); chi-square degrees of freedom; chi-square p-value; whether effect estimates from three input genome-wide association studies were directionally concordant.

本数据集收录了关于重度抑郁症、冠状动脉疾病和2型糖尿病(即心理-心血管-代谢多病共存)的多变量全基因组关联研究的汇总统计数据。数据集分为两组汇总统计数据:包含英国生物样本库(有效样本量=562,507)的版本和不包含英国生物样本库(有效样本量=156,717)的版本。同时,还提供了非同质变异的汇总统计数据(通过移除Q SNP P值小于5e-8的变异以及方向不一致的单变量效应估计值获得)。对于特定的单核苷酸多态性(SNP),汇总统计数据包括染色体;位置;等位基因频率;效应等位基因;非效应等位基因;SNP对常见因素的效应;标准误;效应/SE比率;Z估计值的p值;卡方统计量,提供该SNP的异质性估计(相当于Q SNP指标);卡方自由度;卡方p值;以及来自三个输入全基因组关联研究的效果估计值是否方向一致。
提供机构:
University of Bath Research Data Archive
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