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Distribution of enzymes involved in oxidative Stickland reactions among archaea

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fairdomhub.org2017-06-05 更新2025-03-22 收录
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The distribution of enzymes involved in oxidative Stickland reactions among archaea was estimated using BLAST searches (BLOSUM62) with the protein sequences of acetate-CoA ligase (EC 6.2.1.13, ACS), ketoisovalerate oxidoreductase (EC 1.2.7.7, BC-OR) and indolepyruvate oxdoreductase (EC 1.2.7.8, AR-OR) from Pyrococcus furiosus (Pfu) and Sulfolobus solfataricus (Sso) against all archaea. Positive results are indicated by a '+' (homologue found, e-value < 1e-20) and negative results by a '-' (no homologue found, e-value > 1e-20).

采用BLAST搜索(BLOSUM62)对乙酸辅酶A连接酶(EC 6.2.1.13,ACS)、β-酮异戊酸氧化还原酶(EC 1.2.7.7,BC-OR)和吲哚丙酮酸氧化还原酶(EC 1.2.7.8,AR-OR)的蛋白质序列进行比对分析,以估算参与氧化性Stickland反应的酶在古菌中的分布情况。比对对象为所有古菌,阳性结果以加号 '+' 表示(发现同源酶,e-value < 1e-20),阴性结果以减号 '-' 表示(未发现同源酶,e-value > 1e-20)。
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