Homologs of the genes lanJA, sprF1, sprF2, and sprOR are found associated with both known lanthipeptide BGCs and close to the sprPT/sprH3 gene pair.
收藏Figshare2020-12-22 更新2026-04-28 收录
下载链接:
https://figshare.com/articles/dataset/Homologs_of_the_genes_i_lanJ_i_sub_i_A_i_sub_i_sprF1_i_i_sprF2_i_and_i_sprOR_i_are_found_associated_with_both_known_lanthipeptide_BGCs_and_close_to_the_i_sprPT_sprH3_i_gene_pair_/13479732
下载链接
链接失效反馈官方服务:
资源简介:
Homology was determined at a cutoff of 30% amino acid identity of the gene products. Within Streptomyces genomes, all homologs were found within the analyzed 1,295 genomes. It was then checked whether these homologs overlapped with an antiSMASH-detected lanthipeptide BGC or were within 15 genes of the sprPT/sprH3 gene pair. sprOR homologs were found within canonical lanthipeptide BGCs as well as associated with the spriPT/sprH3 gene pair, suggesting its association with lanthipeptide BGCs. For non-Streptomyces genomes, the sprPT/sprH3 gene pair was first detected, and homologs of the given queries were found within the 15 surrounding genes. Homologs of lanJA and sprF1 are often found associated with sprPT/sprH3 gene pair, suggesting they are involved in lanthipeptide biosynthesis. (XLSX)
创建时间:
2020-12-22



