Minimizer collision statistics (BLEND: A Fast, Memory-Efficient, and Accurate Mechanism to Find Fuzzy Seed Matches in Genome Analysis)

This dataset includes the statistics for the minimizers that generate the same hash value (i.e., collisions). The hash values are generated using a low-collision hash function and the SimHash technique in BLEND.

*collision_stats.txt files include the overall collision statistics for a tool and configuration of the tool (i.e., the number of colliding minimizer pairs with a certain edit distance and their ratio to all number of collisions). For example blend_n3_collision_stats.txt shows the statistics for BLEND where the number of neighbors is set to 3 when running BLEND.

_sim.csv files include all minimizer pairs with the same hash value and the edit distance between them.