Whole-genome and pan-genome analyses reveal genomic differences among nontypeable Haemophilus influenzae isolates from bronchiectasis, community-acquired pneumonia, and chronic obstructive pulmonary disease

This project presents the hybrid Oxford Nanopore-Illumina genome assemblies of three clinical nontypeable Haemophilus influenzae (NTHi) isolates. Each isolate represents a major respiratory disease: one from a patient with bronchiectasis, one from a patient with community-acquired pneumonia (CAP), and one from a patient with chronic obstructive pulmonary disease (COPD).