Dataset for "Divergent selection and primary gene flow shape incipient speciation of a riparian tree on Hawaii Island"
收藏资源简介：
HawaiiPopulation_Raw.bcf.gz - Unfiltered SNP + INDEL VCF file for Hawaii Island Metrosideros HawaiiPopulation_FILTERED_SNP.bcf.gz - Filtered SNP VCF for Hawaii Island Metrosideros Population_WithOutgroup_Raw.vcf.gz - Unfiltered SNP + INDEL VCF file used in analysis that grouped G<sub>H1</sub>, G<sub>H2</sub>, N subpopulation with the outgroup samples. Population_WithOutgroup_FILTERED_SNP.vcf.gz - Filtered SNP VCF file used in analysis that grouped G<sub>H1</sub>, G<sub>H2</sub>, N subpopulation with the outgroup samples. Population_WithOutgroup.geno.gz - Genotype file generated from the genomic_general from S. Martin and used as input for Dxy and Fst window analysis Popgene_stat* - 5, 10, and 50 kbp windows of calculating pi, Dxy, Fst, Omega, Hscan, and H12 statistics GPHOCS_INPUT.txt - Input data file for GPhoCS analysis GPHOCS_control_* - GPhoCS control file DADI_INPUT* - Input 2D-SFS file for dadi analysis
