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Raw data for paper: Insights into the role of root exudates in bacteriophage infection dynamics

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DataCite Commons2025-06-21 更新2024-08-19 收录
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The raw data describe the following experiments that investigated the effects of bacterial necromass in <i>B. distachyon</i> rhizosphere in EcoFAB 2.0.<sup>15</sup>N-necromass Isotope Labeling Experiment (PhageN): This experiment examines how phage-lysed (gh-1 phage) and uninfected <sup>15</sup>N-labeled and unlabeled <i>Pseudomonas putida</i> necromass affects nitrogen uptake by <i>Brachypodium distachyon</i> and the composition of rhizosphere exometabolitesNecromass Incubation Experiment with and without Plants (LysTxCtrl): This experiment investigates the turnover of bacterial necromass with and without <i>Brachypodium distachyon</i>.Bioassays with exudate metabolites effects on virocell growth <i>in vitro</i>Impact of live and lysed <i>P. putida </i>on <i>B. distachyon </i>growthThe file contains:Root and shoot biomass, N%, and 15N-at%DOC and TN levels in necromass medium before and after plant incubationUntargeted metabolomics features list with GNPS annotation in the PhageN experimentIdentified metabolites in the PhageN experimentStable isotope labeling metabolomics for the PhageN experimentIdentified metabolites and intensities in the LysTxCtrl experimentBioassays #1-4: OD values of bacteria +/- phage with exudate compoundsBioassays #3-4: PFU counts phage grown with exudate compoundsOD vs cell counts for <i>P. putida</i>Cell counts of <i>P. putida</i> after lysisPlant biomass after inoculation with <i>P. putida</i>Plant biomass after exposure to the bacterial lysate concentration gradientNO3-N, NH4-N, Protein-N in lysed bacteria and media<br>
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figshare
创建时间:
2024-07-15
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