Raw data and code for analysis
收藏资源简介:
The code is written in R, as a rmd file and the following dataesets can be read into this project code to generate all the analysis, figures and tables in the manuscript. Descriptions of each dataset are below: lucunter_Pcrit.csv - raw data for Pcrit trials, SMR calculated from these runs urchin_respirometry_main_new.csv - summary dataset of SMR for each sea urchin trial urchin_survival.csv - this dataset pools the survival data by time hour (i.e. survival by hour) urchin_LT.csv - this dataset summarizes the LT05 and LT50 results by treatment extremes.csv - this dataset is the dissolved oxygen and temperature 9 month timeseries from the 3 m Tierra Obscura reef duration2.csv - dataset with maximum temperatures and corresponding O2 each day in the timeseries from the "extremes.csv" - this is used to create Figure 6 SST_Both_Final_TXT_outlier_rm_updated.txt - dataset of water temperature measured from 2001-2019 at two reef sites (used to create Figure 7) MHW_stats.csv - summary dataset of marine heatwave occurrences and MHW days
本代码采用R语言编写,格式为R Markdown(.rmd)文件。以下数据集可导入本项目代码,用于复现手稿中的全部分析、图表与表格。各数据集说明如下: lucunter_Pcrit.csv —— Pcrit试验的原始数据,包含由此批试验测算得到的标准代谢率(Standard Metabolic Rate, SMR) urchin_respirometry_main_new.csv —— 所有海胆呼吸代谢试验的标准代谢率汇总数据集 urchin_survival.csv —— 按小时汇总的存活数据(即按小时统计存活率) urchin_LT.csv —— 按处理组极端条件汇总LT05与LT50结果的数据集 extremes.csv —— 取自3米深Tierra Obscura礁的9个月溶解氧与温度时间序列数据集 duration2.csv —— 包含extremes.csv时间序列中每日最高温度及对应溶解氧的数据集,用于生成图6 SST_Both_Final_TXT_outlier_rm_updated.txt —— 2001-2019年在两个珊瑚礁点位采集的海水温度数据集,用于生成图7 MHW_stats.csv —— 海洋热浪(Marine Heatwave, MHW)发生情况与热浪天数汇总数据集



