five

IS-Seq: a novel bioinformatics pipeline for integration sites analysis

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NIAID Data Ecosystem2026-05-01 收录
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https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE203211
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IS-Seq pipeline is developed,and 4 data sets are used to compare different abundance estimation methods of this pipeline HL60 cell line are transduced with a lentiviral vector, ddPCR is used to measure their average VCN, the gDNA from clone CL6 with average VCN=1 was diluted into gDNA from the transduced polyclonal HL60 bulk population at different relative contributions (100%, 75%, 50%, 10%, 1% and 0%)
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2023-08-09
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