Processed read counts from macrophage RNA-seq and ATAC-seq experiments

RNA-seq files: RNA_count_matrix.txt.gz - raw read counts RNA_cqn_matrix.txt.gz - read counts quantile normalised with the cqn R package RNA_gene_metadata.txt.gz - information about the genes RNA_sample_metadata.txt.gz - information about the samples ATAC-seq files: ATAC_count_matrix.txt.gz - raw read counts ATAC_cqn_matrix.txt.gz - read counts quantile normalised with the cqn R package ATAC_peak_metadata.txt.gz - peak coordinates and other metadata ATAC_sample_metadata.txt.gz - sample metadata ATAC_consensus_peaks.gff3.gz - GFF3 file containing the GRCh38 coordinates of the peaks