Additional file 4: Table S3. of A comprehensive joint analysis of the long and short RNA transcriptomes of human erythrocytes

Summary of known microRNAs. Number of sequence reads was determined with either counts from known microRNA sequence search (Seq search) or miRDeep output, using the highest number of reads for that sequence. Listed genomic locations for mature microRNA sequences are relative to RefSeq annotated transcripts in UCSC genome browser (hg38). For mature microRNA sequences spanning both introns and coding region, or UTR or coding of alternative transcripts, sequence is listed in coding region. Conservation to human (H), chimp (C), rhesus monkey (R), dog (D), mouse (M), and zebrafish (Z) are listed. Conservation of mature microRNA sequence indicates exact sequence alignment in listed species, allowing for up to one base mismatch outside of the microRNA seed sequence (nucleotides 2â 8), and no mismatches within the seed sequence. (XLSX 45 kb)

已知微小核糖核酸（microRNA）汇总。序列读数的计数可通过已知microRNA序列比对（Seq search）结果或miRDeep分析输出值确定，取该序列的最高读数作为最终统计值。成熟microRNA序列的标注基因组位置，均基于UCSC基因组浏览器（hg38）中RefSeq注释的转录本进行定位。若成熟microRNA序列同时跨越内含子与编码区，或跨越可变转录本的非翻译区（Untranslated Region, UTR）、编码区，则将该序列归类至编码区项下进行标注。本数据集同时列出了该序列与人类（H）、黑猩猩（C）、恒河猴（R）、犬（D）、小鼠（M）及斑马鱼（Z）的保守性信息。成熟microRNA序列的保守性判定标准为：在上述标注物种中可实现精确序列比对，且在microRNA种子序列（第2至8位核苷酸）以外区域最多允许存在1个碱基错配，种子序列区域内不得出现任何碱基错配。（XLSX格式，45 KB）