RNA-seq and sRNA-seq data of root tissues of two cultivars (jimian11, zhongzhimian2) of upland cotton

So far, there are few reports on integrative analysis of mRNAs and miRNAs expression to reveal the complicated network involved in regulating the response to V. dahliae infection in resistant and susceptible cotton genotypes, which lead to the knowledge of miR-NA-mRNA regulatory mechanisms associated with upland cotton resistant to Verticillium wilt is still limited. Therefore, a genome-wide profiling of both mRNAs and miRNAs may shed more light on the underlying regulatory mechanisms.