Additional file 2 of Both semi-dwarf and photoperiod-insensitive traits in rice were important for the Green Revolution

Supplementary Material 2: Table S2. ANOVA for plant height of the 11 SD1 haplotypes. Table S3. Statistical analysis of plant height for the SD1 haplotypes. Table S4. Distribution of GR, EQ, and ER at aa positions 100 and 340 in the 3K panel. Table S5. Accessions used for phylogenetic analysis of type 7 sd1 alleles. Table S6. Accessions used for phylogenetic analysis of type 6 sd1 alleles. Table S7. Accessions used for phylogenetic analysis of types 6 and 10 sd1 alleles. Table S8. Taiwanese rice landraces used in this study. Table S9. Accessions used for phylogenetic analysis of type 7 SD1 genes. Table S10. Accessions used for phylogenetic analysis of 67 accessions containing type 7 sd1 alleles. Table S11. Accessions used for phylogenetic analysis of 10 Taiwanese and wild rice accessions harboring type 7 sd1 alleles. Table S12. Accessions used to calculate the selection parameters for type 2 SD1 genes. Table S13. Selection parameters for 4 SD1 haplotypes. Table S14. Distribution of hd1 type 7 and type 13 alleles among 3K accessions with loss-of-function sd1 mutations in Asian rice-growing countries. Table S15. Gene IDs, Plant Ontology (PO) and Trait Ontology (TO) annotations of GA20ox homologs in rice. Table S16. Dee-Geo-Woo-Gen (DGWG)-related accessions and their spellings in seed stock centers