series16_GSE147507 : SARS-CoV-2 (USA-WA1/2020) viral gene expression from infected (MOI 2.0) A549 Cells+ACE2
收藏DataCite Commons2020-09-21 更新2024-07-28 收录
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https://figshare.com/articles/dataset/series16_GSE147507_SARS-CoV-2_USA-WA1_2020_viral_gene_expression_from_infected_MOI_2_0_A549_Cells_ACE2/12907469
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资源简介：
RNA-Seq reads (FASTQ) of biological triplicates from A549 cells transfected with exogenous ACE2 and then infected with SARS-CoV-2 (USA-WA1/2020, MOI 2.0) (series16_GSE147507) were downloaded from NCBI SRA, and data analysis was performed using CLC Genomics workbench (CLC v20). The reads were first aligned to the human genome (hg38) with annotations (Ensemble v91), and then all unmapped reads were aligned to the SARS-Cov-2 reference genome NC_045512. The expression of each virus gene is quantified and reported as total counts and transcripts per million (TPM).
提供机构：
figshare
创建时间：
2020-09-16
