Additional file 1 of The gold-ringed octopus (Amphioctopus fangsiao) genome and cerebral single-nucleus transcriptomes provide insights into the evolution of karyotype and neural novelties
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https://springernature.figshare.com/articles/dataset/Additional_file_1_of_The_gold-ringed_octopus_Amphioctopus_fangsiao_genome_and_cerebral_single-nucleus_transcriptomes_provide_insights_into_the_evolution_of_karyotype_and_neural_novelties/22609403
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Additional file 1: Table s1. Statistics of Nanopore Clean Data. Table s2. Statistics of Nanopore Data after correction. Table s3. Comparisons of octopod genomes. Table s4. Gene information of Amphioctopus fangsiao genome. Table s5. Repeat statistics of Amphioctopus fangsiao genomes. Table s6. Comparison of genome size and repeat content in cephalopods. Table s7. Details of cephalopod repeats. Table s8. Repeat content in present study. Table s9. Percentage of cells that derived from two sequencing platforms in each cluster (before combining). Table s10. Cell markers in the octopod supra-brain. Table s11. Marker genes used in present study. Table s12. Counts of protocadherin, GPCR, and C2H2 ZNF genes in each cell cluster. Table s13-18. Average expression of protocadherin, GPCR, C2H2 ZNF genes in each cell cluster.
附加文件1:表s1:纳米孔(Nanopore)清洁数据统计。表s2:校正后纳米孔数据统计。表s3:八足类基因组比对分析。表s4:长蛸(Amphioctopus fangsiao)基因组基因信息。表s5:长蛸(Amphioctopus fangsiao)基因组重复序列统计。表s6:头足类基因组大小与重复序列含量比对。表s7:头足类重复序列详情。表s8:本研究重复序列含量统计。表s9:合并前各细胞簇中两种测序平台来源细胞占比。表s10:八足类脑上区细胞标记物。表s11:本研究使用的标记基因。表s12:各细胞簇原钙粘蛋白、G蛋白偶联受体(GPCR)及C2H2锌指(C2H2 ZNF)基因数量统计。表s13-18:各细胞簇中原钙粘蛋白、G蛋白偶联受体、C2H2锌指基因的平均表达量。
创建时间:
2023-06-28



