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An unusual tandem kinase fusion protein confers leaf rust resistance in wheat

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Mendeley Data2024-04-13 更新2024-06-27 收录
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https://datadryad.org/stash/dataset/doi:10.5061/dryad.gxd2547pw
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资源简介:
The file 'ThatcherLr9_whole_genome_assembly.fasta.gz' contains the DNA sequence of the whole genome assembly of hexaploid bread wheat (Triticum aestivum L. AABBDD, 2n = 6x = 42) cv. ThatcherLr9. The file 'Aegilops_umbellulata_TA1851_whole_genome_assembly.fasta.gz' contains the DNA sequence of the whole genome assembly of diploid Aegilops umbellulata (UU, 2n = 2x = 14) accession TA1851. Data was produced using PacBio HiFi sequencing and assembled with Hifiasm. The files 'ThatcherLr9_IsoSeq_cluster_hq.fasta.gz' and 'TA5605_IsoSeq_cluster_hq.fasta.gz' contain high-quality transcript isoforms from Puccinia triticina infected leaf samples of ThatcherLr9 and TA5605, respectively. Data was produced using PacBio long-read isoform sequencing (Iso-Seq) and processed following the IsoSeq pipeline (v.3.; https://github.com/PacificBiosciences/IsoSeq). The Lr9 CDS and genomic sequences are present in FASTA format.

文件`ThatcherLr9_whole_genome_assembly.fasta.gz`包含六倍体普通小麦(*Triticum aestivum* L. AABBDD,2n=6x=42)品种ThatcherLr9的全基因组组装DNA序列。 文件`Aegilops_umbellulata_TA1851_whole_genome_assembly.fasta.gz`包含二倍体伞穗山羊草(*Aegilops umbellulata*,UU,2n=2x=14)种质TA1851的全基因组组装DNA序列。 本数据集的数据通过PacBio HiFi测序获得,并使用Hifiasm软件完成组装。 文件`ThatcherLr9_IsoSeq_cluster_hq.fasta.gz`与`TA5605_IsoSeq_cluster_hq.fasta.gz`分别包含来自受小麦柄锈菌(*Puccinia triticina*)侵染的ThatcherLr9与TA5605叶片样本的高质量转录本异构体。 该转录本数据通过PacBio长读长转录本测序(Iso-Seq)获得,并遵循IsoSeq流程(v.3.; https://github.com/PacificBiosciences/IsoSeq)进行处理。 Lr9的编码序列(CDS,Coding Sequence)与基因组序列以FASTA格式(FASTA)存储。
创建时间:
2023-06-28
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