five

High-quality Neurospora tetrasperma genome assemblies

收藏
Figshare2017-09-21 更新2026-04-08 收录
下载链接:
https://figshare.com/articles/dataset/High-quality_Neurospora_tetrasperma_genome_assemblies/5327515/1
下载链接
链接失效反馈
官方服务:
资源简介:
This dataset contains ten high-quality genome assemblies from ten strains of the fungal genus <i>Neurospora</i>. The genomes are released together with the paper "Large-scale suppression of recombination predates genomic rearrangements in Neurospora tetrasperma" by Sun et al., which is published in Nature Communications (2017).<br><br>Three of the genomes have been assembled using Illumina paired-end and matepair data, which have been scaffolded using optical mapping. The other seven have been assembled using only PacBio data, but have also been error-corrected using Illumina paired-end reads. Raw PacBio reads have been deposited in the Sequence Read Archive (SRA) as part of BioProject PRJNA398702. Raw Illumina reads have also been deposited at SRA in the BioProject PRJNA239947 (matepair reads) and PRJNA239947 (paired-end reads). See Sun et al. for further details.<br><br>Most strains can be ordered from the Fungal Genetics Stock Center at http://www.fgsc.net. Use the FGSC numbers provided below.<br><br>Genomes:<br><br>965A (<i>Neurospora tetrasperma</i>)<br>Technique: Optical mapping + Illumina<br>FGSC number: 10751<br><br>965a (<i>N. tetrasperma</i>)<br>Technique: PacBio<br>FGSC number: 10752<br><br>9033 (<i>N. tetrasperma</i>)<br>Technique: Optical mapping + Illumina<br>FGSC number: 9033<br><br>9034 (<i>N. tetrasperma</i>)<br>Technique: Optical mapping + Illumina<br>FGSC number: 9034<br><br>CJ73 (<i>N. tetrasperma</i>)<br>Technique: PacBio<br>FGSC number: 9045<br><br>CJ74 (<i>N. tetrasperma</i>)<br>Technique: PacBio<br>FGSC number: 9046<br><br>CJ85 (<i>N. tetrasperma</i>)<br>Technique: PacBio<br>FGSC number: 2503<br><br>CJ86 (<i>N. tetrasperma</i>)<br>Technique: PacBio<br>FGSC number: 2504<br><br>8807 (<i>N. intermedia</i>)<br>Technique: PacBio<br>FGSC number: 8807<br><br>W1434 (<i>N. sitophila</i>)<br>Technique: PacBio<br>FGSC number: -
提供机构:
Johannesson, Hanna; Svedberg, Jesper; Hiltunen, Markus; Corcoran, Pádraic; Sun, Yu
创建时间:
2017-08-21
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作