Car_ign_100+amino_acids_ORFs_from_1200bp+_contigs_to_Takifugu_all_hits
收藏DataONE2014-01-14 更新2024-06-27 收录
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资源简介:
Gene list of all hit descriptors for potential open reading frames (ORFs) >=100 amino acids extracted from nucleotide contigs >=1,200 bp assembled from 139,329,276 100 bp pair end (PE) reads from an Illumina HiSeq 2000 using Ray v2.0.0 for Caranx ignobilis. Subject database (DB) was the protein list from the fully sequenced genome of Takifugu available from NCBI. This file is filtered to only contain hits with bit scores >=80.
本数据集为针对珍鲹(Caranx ignobilis)的基因列表:采用Illumina HiSeq 2000测序平台生成的139,329,276条100 bp双端(PE)测序读段,通过Ray v2.0.0软件组装得到长度≥1,200 bp的核苷酸重叠群,从中提取出长度≥100个氨基酸的潜在开放阅读框(open reading frame, ORF)的全部比对命中描述符集合。比对数据库(DB)为NCBI公开的东方鲀属(Takifugu)全测序基因组对应的蛋白质序列集。本文件已完成过滤,仅保留比特分值≥80的比对命中结果。
创建时间:
2014-01-14



