Simulated Tomograms used for TomoTwin

Simulated Training Tomograms for the TomoTwin particle picking procedure. It contains 8 sets: 7 simulation named tomo_simulation_round_X and 1 generalization tomogram named tomo_simulation_gen. The folder structure is as follows: files_filament: PDB and configuration file for adding actin filaments to the tomogram pdbs: Particle PDBs used for simulation. tomo_NUMBER_TIMESTAMP: Tomogram folders. Each folder contains tiltseries_rec.mrc: The reconstruction coords: .coord files with coordinates of the individual proteins. All tomograms where simulated using the TEM-Simulator-Scripts. The command looked like this: tsimscripts_pipe.sh --pdbs pdbs/*.pdb --npdbs 150 --output out/tomo_01/ --pdbs_fil files_filament/*.pdb --settings_fil files_filament/*.json --nsubs 100面向TomoTwin粒子挑选流程的模拟训练断层扫描图像（Tomogram）。该数据集共包含8组数据：7组为命名为tomo_simulation_round_X的模拟断层图，以及1组命名为tomo_simulation_gen的泛化断层图。 文件夹结构如下： - files_filament：用于向断层图中添加肌动蛋白丝的蛋白质数据库（Protein Data Bank, PDB）文件与配置文件 - pdbs：用于模拟的粒子PDB文件 - tomo_NUMBER_TIMESTAMP：断层图文件夹。每个文件夹均包含以下内容： - tiltseries_rec.mrc：重建后的倾斜序列文件 - coords：存储单个蛋白质坐标的.coord格式坐标文件 所有断层图均通过TEM模拟脚本套件（TEM-Simulator-Scripts）生成，所用命令格式如下： tsimscripts_pipe.sh --pdbs pdbs/*.pdb --npdbs 150 --output out/tomo_01/ --pdbs_fil files_filament/*.pdb --settings_fil files_filament/*.json --nsubs 100