Gut Metagenome Assemblies for Veseli et al. 2023

A collection of anvi'o contigs databases for 408 human fecal metagenome assemblies from the study by Veseli et al. titled "High metabolic independence is a determinant of microbial resilience in the face of gut stress". These are publicly-available gut metagenomes originally obtained from several studies of the gut microbiome. See `METAGENOMES_INFO.txt` file for references and sample SRA accessions. The metagenomes were assembled individually using IDBA-UD as part of the anvi'o metagenomics workflow in anvi'o v7.1-dev. As part of this workflow, they were annotated with KEGG KOfams using `anvi-run-kegg-kofams` and a KEGG snapshot from December 12, 2020 (modules database hash value `45b7cc2e4fdc`). See manuscript and its reproducible workflow for details.本数据集包含408个人类粪便宏基因组拼装产物对应的anvi'o重叠群数据库，源自Veseli等人发表的题为《高度代谢独立性是肠道应激下微生物恢复力的决定因素》的研究。该数据集所涉肠道宏基因组均为公开可获取资源，最初来源于多项肠道微生物组相关研究。如需获取参考文献与样本SRA(Sequence Read Archive)登录号，请查看`METAGENOMES_INFO.txt`文件。所有宏基因组均采用IDBA-UD工具进行独立拼装，属于anvi'o v7.1-dev版本anvi'o宏基因组分析流程的一部分。作为该流程的一环，研究使用`anvi-run-kegg-kofams`工具，结合2020年12月12日发布的KEGG(京都基因与基因组百科全书)快照（模块数据库哈希值为`45b7cc2e4fdc`），对样本完成了KEGG直系同源家族（KOfams）注释。如需了解详细信息，请参阅相关研究论文及其配套可复现分析流程。