遇见数据集

SpliceAI_rocksdb_hg38_chr11

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Zenodo2023-05-17 更新2026-05-26 收录
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SpliceAI RocksDB for chromosome 11 of hg38 as used in the AbSplice publication: https://www.nature.com/articles/s41588-023-01373-3 Precomputed SpliceAI scores for all SNVs and indels up to 4 nucleotides are stored in this database. To use this database for fast computation of SpliceAI predictions see: https://github.com/gagneurlab/spliceai_rocksdb This is also implemented in the AbSplice package: https://github.com/gagneurlab/absplice This dataset includes SpliceAI scores. The scores are free for academic and not-for-profit use; other use requires a commercial license from Illumina, Inc., see the GitHub repository of SpliceAI: https://github.com/Illumina/SpliceAI/tree/master

适配hg38参考基因组第11号染色体的SpliceAI RocksDB数据集,为AbSplice发表论文中所使用的版本:https://www.nature.com/articles/s41588-023-01373-3。该数据库存储了所有长度不超过4个核苷酸的单核苷酸变异(SNV)与插入缺失变异(indel)的预计算SpliceAI评分。若需借助该数据库快速生成SpliceAI预测结果,请参考:https://github.com/gagneurlab/spliceai_rocksdb。该功能同样已集成于AbSplice工具包中:https://github.com/gagneurlab/absplice。本数据集包含SpliceAI评分数据。该评分仅对学术研究及非盈利使用免费开放,其他商业用途需获得Illumina公司的商业授权,详细信息请参阅SpliceAI的GitHub仓库:https://github.com/Illumina/SpliceAI/tree/master

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Zenodo
创建时间:
2023-05-17
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