Annotations for ‘akiapōlā‘au and Hawai‘i ‘amakihi genomes
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This repository provides the annotations and genome assemblies generated in Campana et al. (2020). The de novo ‘akiapōlā‘au assembly is provided in file Aki.fa.gz, with its gene predictions in Aki_augustus_all.gff.gz. The Augustus predictions for the Callicrate et al. (2014) Hawai‘i ‘amakihi genome is given Ama_v1_augustus_all.gff.gz. The ‘akiapōlā‘au-realigned Hawai‘i ‘amakihi consensus sequence and gene predictions are in Ama_v2.fa.gz and Ama_v2_augustus_all.gff.gz respectively. Predicted protein sequences for these annotations are in the files with "_proteins.faa.gz" appended to the end. The InterProScan predictions for the three datasets are provided in the InterProScan-5.33-72.0.tgz file.
创建时间：
2023-03-29
