Representative sequences for colorectal cancer additive log ratios

Representative sequences and corresponding feature rank tables calculated in Debelius et al, The local tumor microbiome is associated with survival in late-stage colorectal cancer patients (doi: https://doi.org/10.1101/2022.09.16.22279353) file_s1_tissue_alr_sequences.fasta goes with tissue_only_ranks.tsv and corresponds to Figure 1 in the manuscript. file_s2_interaction_dr_sequences.fasta corresponds to figure 2 and links to interaction_models_interaction_ranks.tsv and interaction_models_tissue_ranks.tsv file_s3_tumor_rPCA_alr_sequences.fasta corresponds to Figure 3 and links to tumor_survival_index_ranks_file3.tsv. The rank files provide the rank and rank group; the fasta files provide the reference sequences for the data.本数据集收录了Debelius等人在论文《局部肿瘤微生物组与晚期结直肠癌患者生存预后相关》（DOI: https://doi.org/10.1101/2022.09.16.22279353）中计算得到的代表性序列及对应特征排名表。其中，file_s1_tissue_alr_sequences.fasta与tissue_only_ranks.tsv配套使用，对应手稿中的图1；file_s2_interaction_dr_sequences.fasta对应手稿图2，关联文件为interaction_models_interaction_ranks.tsv与interaction_models_tissue_ranks.tsv；file_s3_tumor_rPCA_alr_sequences.fasta对应手稿图3，关联文件为tumor_survival_index_ranks_file3.tsv。排名文件提供排名信息及排名组别，FASTA文件则为该数据集提供参考序列。