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Additional file 1 of Functional differentiation determines the molecular basis of the symbiotic lifestyle of Ca. Nanohaloarchaeota

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Mendeley Data2024-06-27 更新2024-06-27 收录
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https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Functional_differentiation_determines_the_molecular_basis_of_the_symbiotic_lifestyle_of_Ca_Nanohaloarchaeota/21340502/1
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Additional file 1: Supplementary Table S1-S7. Table S1. The occurrence frequency of 48 single-copy genes and estimated genomic completeness of all Ca. Nanohaloarchaeota genomes. Table S2. Basic genomic features of publicly available Nanohaloarchaeota genome. Table S3. KEGG-based functional annotation of five Nucleotidisoterales MAGs including three from Qijiaojing lake and two from public database. Table S4. Gene counts of carbohydrate metabolism related genes identified by comparing to CAZy database. Table S5. Detected peptidases in Nucleotidisoterales MAGs. Table S6. Psiblast results of SPEARE proteins in Ca. Nanohaloarchaeota genomes. Table S7. Identification of signal peptides in genes predicted from Nucleotidisoterales MAGs.

附加文件1:补充表S1~S7。表S1:48个单拷贝基因的出现频率及所有候选纳米嗜盐古菌(Ca. Nanohaloarchaeota)基因组的估算基因组完整度。表S2:公开可用的纳米嗜盐古菌基因组的基本基因组特征。表S3:基于京都基因与基因组百科全书(KEGG)的5个核苷单胞菌目(Nucleotidisoterales)宏基因组组装基因组(Metagenome-Assembled Genome, MAG)的功能注释,其中3个基因组来自七角井湖,另外2个来自公共数据库。表S4:通过与碳水化合物活性酶(CAZy)数据库比对鉴定得到的碳水化合物代谢相关基因的计数。表S5:核苷单胞菌目宏基因组组装基因组中检测到的肽酶。表S6:候选纳米嗜盐古菌基因组中SPEARE蛋白的位置特异性迭代BLAST(PSI-BLAST)分析结果。表S7:核苷单胞菌目宏基因组组装基因组预测基因的信号肽鉴定结果。
创建时间:
2023-06-28
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