geNomad database
收藏资源简介:
Marker database used by geNomad for virus and plasmid identification. <strong>genomad_db_v1.2.tar.gz:</strong> MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's VMR number 19. <strong>genomad_hmm_v1.2.tar.gz:</strong> HMMER HMM models. <strong>genomad_metadata_v1.2.tsv.gz:</strong> Metadata for all the 227,897 markers. <strong>genomad_msa_v1.2.tar.gz:</strong> Multiple sequence alignments in FASTA format.
本数据库为geNomad用于病毒与质粒识别的标记数据库。<strong>genomad_db_v1.2.tar.gz</strong>:MMseqs2 轮廓数据库,其所有条目均标注有基于国际病毒分类委员会(International Committee on Taxonomy of Viruses, ICTV)第19版病毒元数据资源(Virus Metadata Resource, VMR)的自定义分类学转储文件所生成的分类学信息。<strong>genomad_hmm_v1.2.tar.gz</strong>:HMMER 隐马尔可夫模型(Hidden Markov Model, HMM)库。<strong>genomad_metadata_v1.2.tsv.gz</strong>:涵盖全部227,897个标记的元数据文件。<strong>genomad_msa_v1.2.tar.gz</strong>:FASTA 格式的多序列比对文件。



