Data files for computational electrophysiology simulations on HcKCR1_C110A
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Structures and input files used for performing computational electrophysiology simulations on HcKCR1_C110A. The description of each folder is as follows:input-structures - models of dark-adapted and laser-flash-illuminated structurestopology - forcefield parameters of retinal, protein, lipids, water, potassium, and chloride ionstrajectory-mdp-files - input files used to run computational electrophysiology simulationstrajectory-output-files - representative trajectories showing ion permeation through the channel (monitor POT8698 and POT387 for outward and inward permeations, respectively)RMSD - data files and script to analyze RMSD variation of the protein backbone atoms
创建时间:
2024-12-21



