Biased 3d Voronoi Foam Data

HDF5 dataset containing the full simulation output for "Scaling Laws in Biologically-Motivated Three-Dimensional Voronoi Foams" (Wigder, 2025). The file stores results from 100 independent simulation runs: 20 runs at each of five division-bias levels (10%, 25%, 50%, 75%, 90%), plus a matched Poisson-Voronoi baseline at every generation. Each run evolves a single-seed 3D periodic Voronoi tessellation through iterative biased cell division until the foam reaches ~2000 cells. Per generation, the file records cell seed coordinates, voxel volumes, centroids, face-count degrees, and the adjacency edge list. A parallel Poisson baseline (same cell count, uniformly random seeds, identical boundary conditions) is stored alongside each biased run. Data are organized hierarchically as /bias_{level}/run_{id}/generation_{id}/{seeds, volumes, centroids, degrees, edges} and /poisson/bias_{level}/run_{id}/generation_{id}/{...}. All analysis and figures in the paper are reproducible from this file using biased_voronoi3d_analysis.py, available at https://github.com/MalcolmWigder/biased-voronoi-foam.本数据集为HDF5格式，包含论文《Scaling Laws in Biologically-Motivated Three-Dimensional Voronoi Foams》（Wigder, 2025）的完整模拟输出结果。该文件存储了100组独立模拟实验的结果：在5种分裂偏置水平（10%、25%、50%、75%、90%）下各开展20次模拟，且每组偏置条件下均配有匹配的泊松-沃罗诺伊（Poisson-Voronoi）基准对照组。每次模拟均以单种子三维周期性沃罗诺伊（Voronoi）镶嵌为初始结构，通过迭代式带偏置细胞分裂过程演化，直至泡沫结构的细胞总数达到约2000个。每一代模拟中，文件均记录了细胞种子坐标、体素体积、质心、细胞面数度数以及邻接边列表。每组带偏置的模拟均附带一组平行泊松基准对照组，该对照组与对应偏置模拟的细胞数量一致、种子均匀随机分布、边界条件完全相同。数据采用层级化组织结构，路径格式为/bias_{level}/run_{id}/generation_{id}/{seeds, volumes, centroids, degrees, edges}以及/poisson/bias_{level}/run_{id}/generation_{id}/{...}。借助项目提供的biased_voronoi3d_analysis.py脚本，可完全复现论文中的所有分析与图表，该脚本可从https://github.com/MalcolmWigder/biased-voronoi-foam 获取。