Summary Statistics Of Transcript Usage Qtls In Naive And Stimulated Macrophages (Part 1)
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Column names: phenotype_id pheno_chr pheno_start pheno_end strand - strand of the phenotype n_snps - number of SNPs tested per phenotype distance - distance from the variant to the phenotype snp_id snp_chr snp_start - position of the SNP snp_end - same as snp_start p_nominal - nominal p-value from QTLTools beta - effect size from QTLTools is_lead - is the variant the lead QTL for the phenotype?
列名说明: - 表型标识符(phenotype_id) - 表型染色体(pheno_chr) - 表型起始位置(pheno_start) - 表型终止位置(pheno_end) - 链方向(strand):表型所在的基因组链方向 - 单核苷酸多态性检测数量(n_snps):每个表型所检测的单核苷酸多态性(Single Nucleotide Polymorphism,简称SNP)数量 - 位点间距(distance):变异位点与表型之间的间距 - 单核苷酸多态性标识符(snp_id) - 单核苷酸多态性所在染色体(snp_chr) - 单核苷酸多态性起始位置(snp_start):单核苷酸多态性的位置 - 单核苷酸多态性终止位置(snp_end):与snp_start取值一致 - 名义p值(p_nominal):来自QTLTools的名义p值 - 效应量(beta):来自QTLTools的效应量 - 是否为优势QTL变异(is_lead):该变异是否为对应表型的优势数量性状基因座(Quantitative Trait Locus,简称QTL)变异



