depinwang/jinyang-quantas-psi-s2-taca-v1
收藏资源简介:
该数据集是一个针对taca事件的PSI(Percent Spliced In)矩阵,采用策略2(基于CellType×Condition的29个伪批量分组)。数据集包含29个组、4075个事件,其中3079个事件(占75.6%)具有至少一个非NA的PSI值。数据矩阵共有4074行和30列,其中第一列为事件ID(#event_id),其余29列分别对应不同细胞类型和条件下的PSI值,例如B细胞、内皮细胞(EC)、单核细胞(如Ly6c_Ccr2_Mo)、巨噬细胞(如Mac-like、Mac1、Mac3_1、Mac3_2)、NK细胞、中性粒细胞、祖细胞、Retnla_Ear2_MoMac、T细胞以及树突状细胞(cDC1、cDC2、cDC3)等,每种细胞类型又分为高脂饮食(HFD)和正常饮食(ND)条件。数据通过OLego v1.1.2模型和Quantas流程生成,适用于剪接事件分析和生物信息学研究。
This dataset is a PSI (Percent Spliced In) matrix for taca events, using Strategy 2 (29 pseudo-bulks by CellType×Condition). It includes 29 groups and 4075 events, with 3079 events (75.6%) having at least one non-NA PSI value. The data matrix consists of 4074 rows and 30 columns, where the first column is the event ID (#event_id), and the remaining 29 columns correspond to PSI values for different cell types and conditions, such as B cells, endothelial cells (EC), monocytes (e.g., Ly6c_Ccr2_Mo), macrophages (e.g., Mac-like, Mac1, Mac3_1, Mac3_2), NK cells, neutrophils, progenitors, Retnla_Ear2_MoMac, T cells, and dendritic cells (cDC1, cDC2, cDC3), each under high-fat diet (HFD) and normal diet (ND) conditions. The data was generated using the OLego v1.1.2 model and Quantas pipeline, suitable for splicing event analysis and bioinformatics research.



