MetaDrugSig
收藏资源简介:
MetaDrugSig is a transcriptomic drug signature database containing consensus gene expression signatures for 1,092 drugs, generated from 6,593 comparisons across 3,683 GEO series. Drug signatures were computed using restricted maximum likelihood (REML) random-effects meta-analysis for drugs with ≥2 independent studies (Tier 1) or edgeR differential expression for single-study drugs (Tier 2). The database covers 66,474 genes and includes per-gene uncertainty metrics (standard error, heterogeneity estimates) not available in existing resources.
MetaDrugSig是一款转录组药物特征数据库,收录了1092种药物的共识基因表达特征,相关数据源自3683个GEO系列中的6593次对比实验。针对包含≥2项独立研究的药物(一级,Tier 1),其药物特征通过限制最大似然(restricted maximum likelihood, REML)随机效应元分析计算得到;而针对仅含单项研究的药物(二级,Tier 2),则采用edgeR差异表达分析进行计算。该数据库覆盖66474个基因,还包含了现有资源中未提供的单基因不确定性指标(标准误、异质性估计值)。



