five

Single Molecule Footprinting - Por distal enhancer

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doi.org2025-01-16 收录
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http://doi.org/10.17632/t7xj4rc62t.1
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Data associated with the single molecule footprinting analysis are provided below and consist of: (i) A folder "fastq_files_all_reads" that includes paired end fastq files (R1 and R2) for the 6 samples considered in the analysis, (ii) A folder "Reconstituted_reads_for_analysis" that includes all reconstituted reads used for generated the clustering analysis and heatmap (number downsampled to the sample with the lowest number of reads) (iii) The script used for the analysis, named "porEnhancerAlignmentClusteringAnalysis.ipynb"

以下提供了单分子足迹分析相关的数据集,具体包括:(i) 一个名为“fastq_files_all_reads”的文件夹,其中包含分析中考虑的6个样本的配对末端fastq文件(R1和R2);(ii) 一个名为“Reconstituted_reads_for_analysis”的文件夹,其中包含用于生成聚类分析和热图的全部重构读段(读段数量已降采样至读段数量最少的样本);(iii) 用于分析的脚本,命名为“porEnhancerAlignmentClusteringAnalysis.ipynb”。
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