H-45 WGS vs IWGSC RefSeq v1.0 Genome Assembly

WGS reads of H-45 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC Triticum aestivum Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q>=30) homozygous; Het = high quality (Q>=30) heterozygous; LowQualHom = low quality (Q

H-45的全基因组测序（Whole Genome Sequencing, WGS）读段（来源链接：http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x）使用Minimap2比对至国际小麦基因组测序联盟（International Wheat Genome Sequencing Consortium, IWGSC）的普通小麦*Triticum aestivum*中国春参考基因组组装版本v1.0。本数据集提供了比对得到的BAM文件（Binary Alignment Map, .bam）及其索引文件（.bam.bai），同时附带了读段比对覆盖度汇总bigWig文件（.bam.bw）。基于上述BAM文件调用单核苷酸多态性（Single Nucleotide Polymorphism, SNP）变异位点，生成了VCF文件（Variant Call Format, .bam.vcf.gz）及其索引文件（.bam.vcf.gz.tbi），同时附带了SNP密度（每10千碱基对的SNP数目）汇总bigWig文件（.bam.vcf.w10000_s10000.bw）。VCF文件包含以下过滤值及其对应含义：PASS = 高质量（Q≥30）纯合变异；Het = 高质量（Q≥30）杂合变异；LowQualHom = 低质量（Q