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Rhodelphis limneticus filtered transcriptome assemblies and protein sequences

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Dryad2019-01-01 更新2026-04-13 收录
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RNA-seq was performed on R. limneticus from mixed culture (including the prey kinetoplastid, Parabodo caudatus and bacteria) and from manually isolated single cells after amplification using the Smart-seq2 protocol. Paired-end reads were generated with the Illumina MiSeq platform and assembled with Trinity. In each case, contamination from prey organisms was subtracted using prey-only transcriptomes. Trinity contigs and Transdecoder protein sequences collapsed at 95% sequence identity with CD-HIT are included.

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2019-01-01
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