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SARS-CoV-2 WGS: IEH Laboratories and Consulting Group

NIAID Data Ecosystem2026-03-14 收录

SARS-CoV-2基因组分析

病毒基因组测序

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP371771 数据链接链接失效反馈

官方服务：

资源简介：

Whole-genome sequencing of SARS-CoV-2 as part of surveillance effort.

应用场景：

创建时间：

2022-11-08

相关数据集

Sample details.

病毒基因组测序

免疫缺陷相关病原体感染

1Total number of MiSeq reads after removal low quality, short or adapter containing reads. 2Viruses known to be present in sample from preliminary analysis. 3Complete or nearly complete genomes obtain

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Additional file 4 of Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

病毒基因组测序

新冠病毒突变分析

Additional file 4:. Table S14. Sequencing coverage metrics.

Figshare2021-04-19 更新20

Detection and molecular characterization of a kobuvirus from diarrheic goat in USA

病毒基因组测序

动物腹泻病原体

We report here the complete genome sequence of a novel caprine kobuvirus from diarrheic kids in Minnesota, USA.

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Summary of the Ion Torrent reads utilized for the detection of viral genomes.

病毒基因组测序

IonTorrent检测

The number of reads are reported for the LibP and LibN DNA pools.

Figshare2017-06-30 更新30

Guidelines for accurate genotyping of SARS-CoV-2 using amplicon-based sequencing of clinical samples

SARS-CoV-2基因组分析

病毒基因组测序准确性

SARS-CoV-2 genotyping has been instrumental to monitor virus evolution and transmission during the pandemic. The reliability of information, which can be extracted from the genotyping efforts, depends

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