Additional file 12 of Trans-ethnic gut microbial signatures of prediabetic subjects from India and Denmark

Additional file 12: Table S10. Differentially abundant phyla, family and genera between NG and PD subjects. Table S10A: Differentially abundant phyla between NG and PD subjects, belonging to the Indian and Danish cohorts (pooled together), identified using a negative binomial Wald test (corrected for geography specific cohort-effect). A positive log2 fold change value indicates higher relative abundance of the OTU in PD subjects and vice-versa. P-values were adjusted for multiple testing using Benjamini-Hochberg correction. Table S10B: Differentially abundant family between NG and PD subjects, belonging to the Indian and Danish cohorts (pooled together), identified using a negative binomial Wald test (corrected for geography specific cohort-effect). A positive log2 fold change value indicates higher relative abundance of the OTU in PD subjects and vice-versa. P-values were adjusted for multiple testing using Benjamini-Hochberg correction. Significantly (padj < 0.05) discriminating families are listed in Table. Table S10C: Differentially abundant genera between NG and PD subjects, belonging to the Indian and Danish cohorts (pooled together), identified using a negative binomial Wald test (corrected for geography specific cohort-effect). A positive log2 fold change value indicates higher relative abundance of the OTU in PD subjects and vice-versa. P-values were adjusted for multiple testing using Benjamini-Hochberg correction. Significantly (padj < 0.05) discriminating genera are listed in Table.